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INTEGRATED ANALYSIS OF SPECIES PRESENCE AND MODULE ENRICHMENT ACROSS HABTATS
BRANCH 1: SPECIES PRESENCE PROFILE ANALYSIS
BRANCH 2: MODULE ENRICEMENT ANALYSIS (FGESA)
INITIAL DATA:


Species Presence Counts

(Shallow, Middle, Deep)

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2 χ² TEST FOR INDEPENDENCE τ
YES


OVERALL P-VALUE ≤ 0.05?

3 χ² POST-HOC PAIRAISE TESTS


(e.g, Bonferroni Correction)

• Shallow vs. Middle

• Shallow vs. Deep

• Middle vs. Deep

KEY OUTCOME 1:


Significant Habitat Pairs for Species Presence

OVERALL CONCLUSIONS


1. Significant Habitat Pairs

2. Enriched Modules per Hattat

INPUT: Modules & padj padj Values


(Shallow, Middle, Deep)

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SHALLOW
MIDDLAT
DEEP DEBAT
FGSEA


Shallow

FGSEA


× Midlow

DEEP


× Deep

Enriched


(Shallow)

Enriched


(Shallow)

Enriched


(Dallow)

KEY OUTCOME 2:


Habitat-Specific Enriched Module Lists

Thesis

by Estephe

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